STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0171PFAM: GCN5-related N-acetyltransferase; KEGG: pat:Patl_0928 GCN5-related N-acetyltransferase. (151 aa)    
Predicted Functional Partners:
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family.
    
  0.900
Bsel_3212
Agmatinase; KEGG: vpa:VPA0169 agmatinase; TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; Belongs to the arginase family.
     
  0.900
speE-2
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
    
  0.900
Bsel_0172
PFAM: Methyltransferase type 12; KEGG: mca:MCA2850 hypothetical protein.
  
 
 0.730
Bsel_0173
Magnesium transporter; Acts as a magnesium transporter.
       0.493
Bsel_2891
PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: afw:Anae109_1427 NAD-dependent epimerase/dehydratase.
 
  
 0.486
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.482
Bsel_2601
KEGG: ppu:PP_2995 DNA topology modulation kinase FlaR, putative.
  
   
 0.426
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.