STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0175KEGG: hch:HCH_04792 beta-glucanase/beta-glucan synthetase; PFAM: glycoside hydrolase family 16. (285 aa)    
Predicted Functional Partners:
Bsel_0326
KEGG: hypothetical protein.
 
     0.558
Bsel_0176
KEGG: oan:Oant_1457 hypothetical protein; Belongs to the UPF0309 family.
       0.478
Bsel_1320
KEGG: cps:CPS_3722 hypothetical protein.
 
     0.462
nagB
Glucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
       0.432
Bsel_0177
Transcriptional regulator, GntR family; KEGG: bmt:BSUIS_B1410 hypothetical protein; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
       0.431
Bsel_0179
TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: ftf:FTF1168c N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; Amidohydrolase 3.
       0.428
Bsel_0321
Transcriptional regulator, LacI family; KEGG: asu:Asuc_1193 DNA-binding transcriptional repressor PurR; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI.
 
     0.420
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.