STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0176KEGG: oan:Oant_1457 hypothetical protein; Belongs to the UPF0309 family. (245 aa)    
Predicted Functional Partners:
Bsel_0179
TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: ftf:FTF1168c N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; Amidohydrolase 3.
 
     0.779
Bsel_0177
Transcriptional regulator, GntR family; KEGG: bmt:BSUIS_B1410 hypothetical protein; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
 
     0.770
nagB
Glucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
       0.723
Bsel_0904
PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: kpu:KP1_0051 putative sugar phosphotransferase component IIB.
 
    0.652
Bsel_0180
KEGG: mxa:MXAN_6161 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
 
     0.634
Bsel_0905
PFAM: putative sugar-specific permease SgaT/UlaA; KEGG: spq:SPAB_00632 ascorbate-specific PTS system enzyme IIC.
 
     0.517
Bsel_0903
Putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: aha:AHA_0173 ascorbate-specific phosphotransferase enzyme IIA component.
 
     0.497
Bsel_0175
KEGG: hch:HCH_04792 beta-glucanase/beta-glucan synthetase; PFAM: glycoside hydrolase family 16.
       0.478
Bsel_0902
KEGG: spe:Spro_4372 transcriptional antiterminator, BglG.
 
     0.417
Bsel_0195
Transcriptional regulator, RpiR family; PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: reh:H16_B1066 transcriptional regulator.
 
   
 0.404
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.