STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0187PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: oan:Oant_3124 ATPase BadF/BadG/BcrA/BcrD type. (303 aa)    
Predicted Functional Partners:
Bsel_0188
PFAM: conserved hypothetical protein; KEGG: mxa:MXAN_4187 hypothetical protein.
 
    0.930
murQ
Glucokinase regulatory-like protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
  
 0.878
Bsel_0189
PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein; K01207 beta-N-acetylhexosaminidase.
 
     0.797
Bsel_0194
PFAM: glycoside hydrolase family 3 domain protein; KEGG: beta-N-acetylglucosaminidase, putative; K01207 beta-N-acetylhexosaminidase.
 
    0.755
Bsel_0195
Transcriptional regulator, RpiR family; PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: reh:H16_B1066 transcriptional regulator.
 
     0.741
anmK
Protein of unknown function UPF0075; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
 
     0.722
Bsel_0191
PFAM: extracellular solute-binding protein family 1; KEGG: dvm:DvMF_0656 extracellular solute-binding protein family 1.
 
    0.684
Bsel_0179
TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: ftf:FTF1168c N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; Amidohydrolase 3.
 
   
 0.531
Bsel_2394
PFAM: FAD linked oxidase domain protein; KEGG: gbm:Gbem_2906 FAD linked oxidase domain protein.
 
   
 0.433
nagB
Glucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
 
  
 0.401
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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