STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0225PFAM: UspA domain protein; KEGG: atc:AGR_L_2094 two-component sensor KdpD. (225 aa)    
Predicted Functional Partners:
Bsel_2662
Hypothetical protein; KEGG: dat:HRM2_14680 HsdR1.
  
     0.642
Bsel_0735
PFAM: protein of unknown function DUF1648.
  
     0.629
Bsel_0620
KEGG: gur:Gura_1221 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
  
 
 0.525
Bsel_2027
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold domain protein; KEGG: gme:Gmet_0987 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein.
  
 
 0.504
Bsel_0226
Hypothetical protein.
       0.473
Bsel_0618
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: pmy:Pmen_0723 response regulator receiver modulated diguanylate cyclase; SMART: GGDEF domain containing protein; response regulator receiver.
  
 
 0.449
Bsel_2021
SMART: GGDEF domain containing protein; response regulator receiver; TIGRFAM: diguanylate cyclase; KEGG: maq:Maqu_3442 response regulator receiver modulated diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver.
  
 
 0.449
Bsel_2732
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: pmy:Pmen_0723 response regulator receiver modulated diguanylate cyclase; SMART: GGDEF domain containing protein; response regulator receiver.
  
 
 0.449
Bsel_0425
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; SMART: MCP methyltransferase CheR-type; PAC repeat-containing protein; TIGRFAM: PAS sensor protein; KEGG: dma:DMR_11050 putative chemotaxis CheB/CheR fusion protein; PFAM: MCP methyltransferase CheR-type; PAS fold-3 domain protein; CheB methylesterase.
  
 
 0.448
Bsel_2576
Hypothetical protein; KEGG: sfu:Sfum_3035 membrane-bound lytic murein transglycosylase B-like.
  
    0.448
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.