STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0238Transposase, IS605 OrfB family; KEGG: hpa:HPAG1_0201 putative transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB. (446 aa)    
Predicted Functional Partners:
Bsel_2709
KEGG: pha:PSHAb0292 putative HNH endonuclease.
  
     0.511
Bsel_2828
KEGG: pha:PSHAb0292 putative HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease.
  
     0.449
Bsel_0237
KEGG: pfl:PFL_0346 hypothetical protein.
       0.447
Bsel_1533
KEGG: noc:Noc_2686 transposase; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family.
  
     0.439
Bsel_0919
Transposase; KEGG: pmr:PMI3711 transposase.
 
  
 0.426
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.