STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0256PFAM: alpha/beta hydrolase fold; KEGG: vap:Vapar_6338 alpha/beta hydrolase fold protein. (319 aa)    
Predicted Functional Partners:
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.682
Bsel_0257
PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: dvl:Dvul_0508 cobalamin synthesis protein, P47K.
  
    0.522
Bsel_0922
Hypothetical protein; KEGG: trichohyalin.
  
 
 
 0.461
birA
biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
  
 0.432
Bsel_1138
Hypothetical protein; KEGG: mfa:Mfla_2304 YVTN beta-propeller repeat-containing protein.
  
     0.422
Bsel_0682
KEGG: hha:Hhal_1920 hypothetical protein.
  
 
   0.410
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.