STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0296Hypothetical protein. (48 aa)    
Predicted Functional Partners:
Bsel_0293
Two component transcriptional regulator, LuxR family; KEGG: apj:APJL_0059 nitrate/nitrite response regulator protein; PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; response regulator receiver.
       0.538
Bsel_0294
Integral membrane sensor signal transduction histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: mei:Msip34_0729 histidine kinase; SMART: ATP-binding region ATPase domain protein.
       0.538
Bsel_0295
PFAM: Cell wall-active antibiotics response protein; KEGG: xcb:XC_1549 hypothetical protein.
       0.538
Bsel_0291
Two component transcriptional regulator, LuxR family; KEGG: sdn:Sden_3055 response regulator receiver; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR.
       0.469
Bsel_0292
PFAM: histidine kinase dimerisation and phosphoacceptor region; KEGG: xcv:XCV0114 two-component system sensor protein.
       0.469
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.