STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0328TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: tdn:Suden_1036 diguanylate cyclase; SMART: GGDEF domain containing protein. (322 aa)    
Predicted Functional Partners:
Bsel_2027
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold domain protein; KEGG: gme:Gmet_0987 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein.
 
 0.937
Bsel_2648
Diguanylate cyclase/phosphodiesterase with extracellular sensor; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; Cache domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: geo:Geob_2297 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein.
 
 0.910
Bsel_0846
KEGG: dar:Daro_1729 metal-dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region.
  
 0.834
Bsel_0674
Diguanylate cyclase/phosphodiesterase with extracellular sensor; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; Cache type 2 domain protein; histidine kinase HAMP region domain protein; KEGG: vfm:VFMJ11_1040 sensory box/GGDEF family protein; SMART: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein.
 
 0.831
Bsel_2670
TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: hha:Hhal_1446 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: EAL domain protein; GGDEF domain containing protein.
 
 0.827
Bsel_1497
Diguanylate phosphodiesterase; KEGG: abu:Abu_0830 EAL domain-containing protein; PFAM: EAL domain protein; SMART: EAL domain protein.
 
 
 
 0.823
Bsel_0880
KEGG: geo:Geob_2297 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain protein; Cache domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein.
 
 
 0.817
Bsel_3166
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: mei:Msip34_0541 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein.
 
 
 0.816
Bsel_1152
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pat:Patl_1682 diguanylate cyclase; SMART: GGDEF domain containing protein.
 
    0.784
Bsel_0327
PFAM: alpha/beta hydrolase fold; KEGG: rlt:Rleg2_6440 alpha/beta hydrolase fold.
       0.773
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.