STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0344Transcriptional regulator, GntR family with LacI sensor; KEGG: vpa:VP1030 LacI family transcription regulator; PFAM: regulatory protein GntR HTH; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein GntR HTH. (372 aa)    
Predicted Functional Partners:
Bsel_0345
Glycerol-1-phosphate dehydrogenase (NAD(P)(+)); KEGG: aph:APH_1193 AraM domain-containing protein; PFAM: 3-dehydroquinate synthase.
 
   
 0.846
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
   
 0.773
Bsel_2723
KEGG: gme:Gmet_0147 glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamine amidotransferase class-II.
    
 
 0.765
Bsel_0341
KEGG: pmu:PM1244 L-ribulose-5-phosphate 4-epimerase; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein.
 
   
 0.715
araB
L-ribulokinase; KEGG: scl:sce3311 ribulokinase; TIGRFAM: L-ribulokinase; PFAM: Carbohydrate kinase, FGGY-like.
 
  
 0.646
Bsel_0417
Transcriptional regulator, LacI family; KEGG: vfm:VFMJ11_A0386 DNA-binding transcriptional repressor EbgR; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI.
  
     0.626
Bsel_0335
PFAM: extracellular solute-binding protein family 1; KEGG: rlg:Rleg_6112 extracellular solute-binding protein family 1.
 
    0.601
Bsel_2233
KEGG: aav:Aave_4199 LacI family transcription regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI.
  
     0.598
xylB
Xylulokinase; KEGG: scl:sce9296 xylulokinase; TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like.
 
 
 
 0.542
Bsel_0339
PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: rlt:Rleg2_5890 alpha-N-arabinofuranosidase.
 
   
 0.539
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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