STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0396PFAM: GCN5-related N-acetyltransferase; KEGG: asa:ASA_3441 ribosomal-protein-serine acetyltransferase. (181 aa)    
Predicted Functional Partners:
Bsel_0398
PFAM: protein of unknown function DUF159; KEGG: ppd:Ppro_0189 hypothetical protein; Belongs to the SOS response-associated peptidase family.
 
     0.789
Bsel_0397
KEGG: hypothetical protein; PFAM: aminoglycoside 3-N-acetyltransferase.
  
    0.747
Bsel_3091
KEGG: aav:Aave_4219 L-lysine 6-monooxygenase (NADPH).
  
  
 0.595
Bsel_0399
KEGG: pap:PSPA7_4664 hypothetical protein.
 
   
 0.586
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.527
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.