STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0399KEGG: pap:PSPA7_4664 hypothetical protein. (339 aa)    
Predicted Functional Partners:
Bsel_0930
1-phosphofructokinase; KEGG: dat:HRM2_08650 PfkB1; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
    0.607
Bsel_0396
PFAM: GCN5-related N-acetyltransferase; KEGG: asa:ASA_3441 ribosomal-protein-serine acetyltransferase.
 
   
 0.586
Bsel_2662
Hypothetical protein; KEGG: dat:HRM2_14680 HsdR1.
  
   
 0.527
Bsel_0397
KEGG: hypothetical protein; PFAM: aminoglycoside 3-N-acetyltransferase.
       0.522
Bsel_0398
PFAM: protein of unknown function DUF159; KEGG: ppd:Ppro_0189 hypothetical protein; Belongs to the SOS response-associated peptidase family.
       0.522
Bsel_1074
PTS system, glucose-specific IIBC subunit; KEGG: stm:STM2758 putative phosphotransferase system IIC component; TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, glucose subfamily, IIA subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; sugar-specific permease EIIA 1 domain; Phosphotransferase system EIIB/cysteine, phosphorylation site.
  
  
 0.481
Bsel_2887
Hypothetical protein; KEGG: tgr:Tgr7_0187 TonB-dependent receptor.
  
     0.438
Bsel_2686
Hypothetical protein.
  
     0.424
Bsel_3250
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: eba:ebA5320 putative 3-hydroxyacyl-CoA dehydrogenase precursor.
 
  
 0.424
Bsel_1851
KEGG: kpe:KPK_2717 hypothetical protein.
  
     0.421
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.