STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0433KEGG: dal:Dalk_0661 two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase. (453 aa)    
Predicted Functional Partners:
Bsel_0432
PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; extracellular solute-binding protein family 3; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; KEGG: dde:Dde_1684 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; extracellular solute-binding protein family 3; histidine kinase A domain protein; PAS domain containing protein.
 
 
 0.948
Bsel_1754
CheC, inhibitor of MCP methylation / FliN fusion protein; KEGG: bbr:BB2580 flagellar motor switch protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein.
  
  
 0.867
Bsel_0425
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; SMART: MCP methyltransferase CheR-type; PAC repeat-containing protein; TIGRFAM: PAS sensor protein; KEGG: dma:DMR_11050 putative chemotaxis CheB/CheR fusion protein; PFAM: MCP methyltransferase CheR-type; PAS fold-3 domain protein; CheB methylesterase.
  
 
 0.851
Bsel_1111
KEGG: bba:Bd0843 RNA polymerase sigma-54 factor; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor.
 
  
 0.805
Bsel_0558
KEGG: gur:Gura_3573 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein.
 
 
 0.734
Bsel_1897
KEGG: dma:DMR_26640 chemotaxis protein CheV; PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver.
  
 
 0.688
Bsel_1763
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: gme:Gmet_0428 NifH/FrxC:cobyrinic acid a,c-diamide synthase.
  
 
 0.642
Bsel_1765
CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; P2 response regulator binding domain protein; KEGG: nam:NAMH_0362 chemotaxis protein CheA; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein.
  
 
 0.634
Bsel_1753
KEGG: hhe:HH1147 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein.
  
  
 0.626
Bsel_1742
KEGG: gme:Gmet_3111 flagellar motor switch protein FliG; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG.
  
  
 0.615
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.