STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0439PFAM: conserved hypothetical protein; KEGG: bpt:Bpet3357 putative secreted protein. (313 aa)    
Predicted Functional Partners:
Bsel_0436
KEGG: pcr:Pcryo_0743 TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; Citrate transporter.
 
     0.650
Bsel_0434
TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: par:Psyc_0746 TRAP-T family transporter periplasmic substrate binding subunit.
 
   
 0.607
Bsel_0899
KEGG: pna:Pnap_4043 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria.
  
     0.533
Bsel_1503
KEGG: sfu:Sfum_3721 TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
  
     0.501
Bsel_1186
KEGG: aeh:Mlg_1943 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
  
     0.479
Bsel_0438
Hypothetical protein.
       0.477
Bsel_1504
TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: oan:Oant_2429 TRAP transporter solute receptor TAXI family protein.
  
   
 0.472
Bsel_1187
KEGG: aeh:Mlg_1941 TRAP dicarboxylate transporter-DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria.
  
     0.468
Bsel_0897
KEGG: efe:EFER_1529 putative TRAP dicarboxylate transporter, DctM subunit precursor, putative transmembrane protein; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; Citrate transporter.
  
     0.449
Bsel_1952
TIGRFAM: membrane protein AbrB duplication; KEGG: pmy:Pmen_1454 putative ammonia monooxygenase.
 
    0.429
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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