STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0464PFAM: protein of unknown function UPF0126; KEGG: ppd:Ppro_2916 hypothetical protein. (202 aa)    
Predicted Functional Partners:
Bsel_0466
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ara:Arad_4048 hypothetical protein.
       0.574
Bsel_0465
Quinone oxidoreductase, YhdH/YhfP family; KEGG: eba:ebA7223 zinc-containing alcohol dehydrogenase; TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein.
       0.564
Bsel_2487
KEGG: bmj:BMULJ_03405 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
  
     0.481
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.