STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0465Quinone oxidoreductase, YhdH/YhfP family; KEGG: eba:ebA7223 zinc-containing alcohol dehydrogenase; TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein. (355 aa)    
Predicted Functional Partners:
Bsel_1899
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: nam:NAMH_0242 pyruvate synthase subunit PorA.
    
 0.919
Bsel_2054
PFAM: AMP-dependent synthetase and ligase; KEGG: sun:SUN_0967 acetyl-CoA synthetase.
   
 
 0.918
Bsel_3117
PFAM: Aldehyde Dehydrogenase; KEGG: dal:Dalk_4987 aldehyde dehydrogenase.
   
 0.915
Bsel_3188
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: gbm:Gbem_2832 acyl-CoA dehydrogenase domain protein.
 
 0.915
Bsel_2244
PFAM: carboxyl transferase; KEGG: mxa:MXAN_1113 propionyl-CoA carboxylase, beta subunit.
  
 
 0.914
Bsel_1900
KEGG: sat:SYN_00157 pyruvate:ferredoxin oxidoreductase gamma subunit; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein.
    
 0.913
Bsel_2251
PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: pla:Plav_1455 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase.
   
 0.911
Bsel_1991
TIGRFAM: formate acetyltransferase; KEGG: dar:Daro_2096 formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical.
     
 0.908
Bsel_3221
KEGG: dde:Dde_3241 phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase.
    
 0.908
Bsel_2781
PFAM: Aldehyde Dehydrogenase; KEGG: sat:SYN_00265 NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.830
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.