STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0470KEGG: gur:Gura_0093 hypothetical protein. (155 aa)    
Predicted Functional Partners:
Bsel_0469
Hypothetical protein.
       0.763
Bsel_0468
PFAM: SNARE associated Golgi protein; KEGG: wsu:WS0198 hypothetical protein.
 
     0.729
Bsel_0467
PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: gbm:Gbem_0457 pyridine nucleotide-disulphide oxidoreductase dimerisation region.
 
     0.705
Bsel_1869
KEGG: pca:Pcar_0832 selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 3.
 
   
 0.645
selA
L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
 
   
 0.641
Bsel_3277
PFAM: extracellular solute-binding protein family 1; KEGG: dde:Dde_0759 putative ABC transporter solute-binding protein.
 
     0.599
Bsel_3276
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dat:HRM2_00340 putative ABC-type transporter permease protein.
 
     0.591
Bsel_0471
KEGG: cbc:CbuK_0645 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
       0.527
Bsel_0472
KEGG: vpa:VPA0033 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.527
Bsel_0473
Hypothetical protein.
       0.527
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.