STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0501PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; KEGG: avi:Avi_5067 sulfate permease. (487 aa)    
Predicted Functional Partners:
Bsel_3141
KEGG: gme:Gmet_3343 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
  
 
 0.689
Bsel_0947
KEGG: dal:Dalk_3426 regulator of chromosome condensation RCC1; PFAM: Ig domain protein group 2 domain protein; glycoside hydrolase family 13 domain protein; regulator of chromosome condensation RCC1; SMART: Ig domain protein group 2 domain protein.
    
   0.648
Bsel_2113
Cytochrome b subunit of the bc complex-like protein; Component of the menaquinol-cytochrome c reductase complex.
    
 
 0.628
Bsel_2114
PFAM: Cytochrome b/b6 domain; KEGG: petB; cytochrome B6.
    
 
 0.621
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
   0.602
Bsel_0500
PFAM: UspA domain protein; KEGG: dvm:DvMF_1529 UspA domain protein.
  
    0.580
Bsel_0499
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bgl:bglu_1g07350 glycosyl transferase.
   
   0.562
sbcD
Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
  
   0.562
Bsel_2495
PFAM: metallophosphoesterase; KEGG: pna:Pnap_1662 metallophosphoesterase.
  
   0.562
Bsel_2386
KEGG: aeh:Mlg_2090 putative monovalent cation/H+ antiporter subunit A; TIGRFAM: monovalent cation/H+ antiporter, subunit 1; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein.
  
  
 0.491
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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