STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0540KEGG: scl:sce3610 phosphoserine phosphatase; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein. (203 aa)    
Predicted Functional Partners:
Bsel_0535
KEGG: aav:Aave_2972 putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
 
 0.961
Bsel_0534
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: pfo:Pfl01_3134 anti-sigma-factor antagonist (STAS).
 
 
 0.958
Bsel_0533
Anti-sigma-factor antagonist; PFAM: Rsbr domain protein; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: bxe:Bxe_B2486 anti-sigma-factor antagonist domain-containing protein.
 
 
 0.957
rsbW
Putative anti-sigma regulatory factor, serine/threonine protein kinase; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B).
 
 
 0.934
Bsel_0537
KEGG: geo:Geob_3040 anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS.
  
 
 0.914
Bsel_0496
TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rlt:Rleg2_5263 signal transduction histidine kinase; SMART: PAC repeat-containing protein.
 
 
 0.911
Bsel_2518
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: scl:sce5570 hypothetical protein.
 
 
 0.885
Bsel_0539
Transcriptional regulator, LuxR family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
 
 0.868
Bsel_0536
PFAM: Stage II sporulation E family protein; Phosphoserine phosphatase RsbU; KEGG: geo:Geob_2606 protein serine phosphatase with GAF(s) sensor(s); SMART: protein phosphatase 2C domain protein.
 
   
 0.826
Bsel_0657
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: scl:sce6798 anti-anti sigma factor protein.
 
 
 0.698
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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