STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0545TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: pat:Patl_1455 ABC transporter related; SMART: AAA ATPase. (574 aa)    
Predicted Functional Partners:
Bsel_0546
TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; KEGG: ses:SARI_02008 cysteine/glutathione ABC transporter membrane/ATP-binding component; SMART: AAA ATPase.
 
 
0.994
Bsel_0544
KEGG: acp:A2cp1_3872 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II.
 
  
 0.977
Bsel_0543
PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: dde:Dde_3204 cytochrome d ubiquinol oxidase, subunit I.
 
  
 0.962
Bsel_2506
PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: afw:Anae109_0981 cytochrome bd ubiquinol oxidase subunit I.
 
  
 0.820
Bsel_0668
TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: ppr:PBPRA1157 cysteine/glutathione ABC transporter membrane/ATP-binding component; SMART: AAA ATPase.
 
  
0.793
Bsel_2507
Cytochrome bd-type quinol oxidase subunit 2-like protein; KEGG: scl:sce2438 terminal oxidase subunit II.
 
  
 0.696
ecfA
ABC transporter related protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
    
0.634
Bsel_2306
KEGG: glo:Glov_1805 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
    
0.433
Bsel_0547
KEGG: avn:Avin_43850 cystathionine gamma-synthase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; DegT/DnrJ/EryC1/StrS aminotransferase.
       0.414
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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