STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0572Transcriptional regulator, PucR family; PFAM: purine catabolism PurC domain protein; KEGG: reu:Reut_B5661 CdaR family transcriptional regulator. (547 aa)    
Predicted Functional Partners:
Bsel_0162
PFAM: protein of unknown function DUF1116; KEGG: lhk:LHK_01303 DUF1116 domain containing protein.
 
     0.732
Bsel_0160
Hypothetical protein; KEGG: lhk:LHK_00981 YlbF.
 
     0.729
Bsel_0161
PFAM: FdrA family protein; KEGG: ecd:ECDH10B_0307 acyl-CoA synthetase.
 
     0.711
Bsel_0571
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pna:Pnap_0618 5-carboxymethyl-2-hydroxymuconate delta-isomerase.
       0.522
birA
biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.431
Bsel_0576
KEGG: avi:Avi_5433 dehydrogenase; TIGRFAM: xanthine dehydrogenase D subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead.
 
   
 0.430
Bsel_0574
Allantoinase; KEGG: scl:sce5876 allantoinase; TIGRFAM: allantoinase; PFAM: amidohydrolase; Amidohydrolase 3.
 
   
 0.417
Bsel_0575
PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: avi:Avi_5433 dehydrogenase.
 
   
 0.407
Bsel_0585
PFAM: aminotransferase class V; KEGG: dda:Dd703_0911 aminotransferase class V.
 
     0.407
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.