STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0643PFAM: iron-containing alcohol dehydrogenase; KEGG: dol:Dole_1139 iron-containing alcohol dehydrogenase. (407 aa)    
Predicted Functional Partners:
Bsel_1978
PFAM: iron-containing alcohol dehydrogenase; KEGG: asu:Asuc_0591 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
 
0.940
Bsel_2781
PFAM: Aldehyde Dehydrogenase; KEGG: sat:SYN_00265 NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.926
Bsel_3117
PFAM: Aldehyde Dehydrogenase; KEGG: dal:Dalk_4987 aldehyde dehydrogenase.
 
 0.885
Bsel_0682
KEGG: hha:Hhal_1920 hypothetical protein.
  
 
 0.724
Bsel_1992
Pyruvate formate-lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.
 
  
 0.691
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.615
Bsel_1991
TIGRFAM: formate acetyltransferase; KEGG: dar:Daro_2096 formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical.
 
  
 0.550
Bsel_1140
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: mxa:MXAN_5136 3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.541
Bsel_0830
PFAM: Fibronectin type III domain protein; KEGG: dal:Dalk_0547 fibronectin type III domain protein.
  
    0.449
Bsel_0644
PFAM: Domain of unknown function DUF1858.
       0.434
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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