STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0645PFAM: Hemerythrin HHE cation binding domain protein; KEGG: dvm:DvMF_1059 putative PAS/PAC sensor protein. (413 aa)    
Predicted Functional Partners:
Bsel_0644
PFAM: Domain of unknown function DUF1858.
 
     0.948
Bsel_0646
Iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
 
     0.662
Bsel_0191
PFAM: extracellular solute-binding protein family 1; KEGG: dvm:DvMF_0656 extracellular solute-binding protein family 1.
   
    0.525
Bsel_1457
PFAM: extracellular solute-binding protein family 1; KEGG: mxa:MXAN_7295 putative sugar ABC transporter, periplasmic sugar-binding protein.
   
    0.525
Bsel_3228
PFAM: extracellular solute-binding protein family 1; KEGG: sme:SM_b21604 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor.
   
    0.525
Bsel_0643
PFAM: iron-containing alcohol dehydrogenase; KEGG: dol:Dole_1139 iron-containing alcohol dehydrogenase.
       0.434
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.