STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0664PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rlg:Rleg_5208 glycerophosphoryl diester phosphodiesterase. (250 aa)    
Predicted Functional Partners:
Bsel_0297
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pen:PSEEN4329 glycerophosphodiester phosphodiesterase.
  
  
 
0.925
Bsel_2344
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pin:Ping_2092 glycerophosphodiester phosphodiesterase.
  
  
 
0.915
Bsel_1231
PFAM: alpha/beta hydrolase fold; KEGG: dol:Dole_2799 alpha/beta hydrolase fold.
    
 0.904
Bsel_0663
PFAM: major facilitator superfamily MFS_1; KEGG: cps:CPS_0975 hypothetical protein.
 
   
 0.785
Bsel_2005
KEGG: ppr:PBPRA1372 sn-glycerol-3-phosphate dehydrogenase subunit A; TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit; PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein.
 
 0.722
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.663
Bsel_0665
KEGG: hypothetical protein.
       0.520
Bsel_2543
KEGG: fph:Fphi_1035 major intrinsic protein family permease; TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.508
Bsel_2541
PFAM: FAD dependent oxidoreductase; KEGG: mxa:MXAN_7329 glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 
 0.451
Bsel_2901
PFAM: extracellular solute-binding protein family 1; KEGG: vha:VIBHAR_06396 ABC-type sugar transport system periplasmic protein.
 
    0.433
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.