STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0676PFAM: protein of unknown function DUF58; KEGG: psa:PST_1154 hypothetical protein. (418 aa)    
Predicted Functional Partners:
Bsel_0677
KEGG: scl:sce8271 hypothetical protein; PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein.
 
  
 0.969
Bsel_0675
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: gur:Gura_0187 ATPase.
 
  
 0.956
Bsel_2118
SMART: Tetratricopeptide repeat; KEGG: TPR Domain containing protein.
 
  
 0.660
Bsel_1258
Small secreted protein-like protein.
  
     0.525
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
       0.524
Bsel_0516
Hypothetical protein; KEGG: antigen 332.
  
     0.470
Bsel_0674
Diguanylate cyclase/phosphodiesterase with extracellular sensor; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; Cache type 2 domain protein; histidine kinase HAMP region domain protein; KEGG: vfm:VFMJ11_1040 sensory box/GGDEF family protein; SMART: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein.
       0.465
nnrE
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]
     
 0.431
Bsel_0965
PFAM: Protein of unknown function DUF1980; KEGG: dal:Dalk_1553 membrane protein-like protein.
  
     0.426
Bsel_1888
Hypothetical protein.
  
     0.424
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.