STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0709PFAM: N-formylglutamate amidohydrolase; KEGG: sml:Smlt3109 hypothetical protein. (290 aa)    
Predicted Functional Partners:
Bsel_0708
D-alanine--D-alanine ligase domain protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
     0.935
Bsel_1220
TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: bxe:Bxe_B2551 formate dehydrogenase gamma subunit.
  
  
  0.921
Bsel_1219
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bav:BAV3144 nformate dehydrogenase, iron-sulfur subunit.
    
  0.900
Bsel_2181
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: wsu:WS0578 iron-sulfur protein precursor.
    
  0.900
Bsel_0707
Gamma-glutamyltransferase; KEGG: bja:bll8231 putative gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase.
 
     0.840
purQ
Phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]
  
  
  0.824
Bsel_2723
KEGG: gme:Gmet_0147 glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamine amidotransferase class-II.
     
 0.812
mqo
TIGRFAM: malate/quinone oxidoreductase; KEGG: avn:Avin_04080 malate:quinone-oxidoreductase; PFAM: Malate:quinone-oxidoreductase; FAD dependent oxidoreductase.
    
  0.809
Bsel_3253
Aspartate racemase; KEGG: dat:HRM2_07710 RacD2; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; Belongs to the aspartate/glutamate racemases family.
    
  0.805
rocA
KEGG: geo:Geob_2608 delta-1-pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family. RocA subfamily.
     
 0.802
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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