STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0710Signal transduction histidine kinase, LytS; PFAM: histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; ATP-binding region ATPase domain protein; KEGG: gme:Gmet_2698 histidine kinase internal region; SMART: ATP-binding region ATPase domain protein. (625 aa)    
Predicted Functional Partners:
Bsel_0711
KEGG: gme:Gmet_2697 LytR/AlgR family transcriptional regulator; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver.
 
 0.997
Bsel_0604
Response regulator receiver and SARP domain protein; KEGG: smt:Smal_0421 two component transcriptional regulator, LytTR family; PFAM: response regulator receiver; transcriptional activator domain; transcriptional regulator domain protein; SMART: response regulator receiver.
 
 0.977
Bsel_0871
KEGG: pst:PSPTO_0127 alginate biosynthesis regulatory protein AlgR; PFAM: response regulator receiver; SMART: response regulator receiver.
 
 
 0.859
Bsel_0884
KEGG: shm:Shewmr7_0055 response regulator receiver protein; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
 
 
 0.708
Bsel_0878
KEGG: sde:Sde_3900 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver.
 
 
 0.681
Bsel_0712
PFAM: carbon starvation protein CstA; KEGG: asa:ASA_1691 carbon starvation protein CstA.
 
   
 0.673
Bsel_0708
D-alanine--D-alanine ligase domain protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
       0.619
Bsel_0707
Gamma-glutamyltransferase; KEGG: bja:bll8231 putative gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase.
       0.610
Bsel_0709
PFAM: N-formylglutamate amidohydrolase; KEGG: sml:Smlt3109 hypothetical protein.
       0.610
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.