STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0735PFAM: protein of unknown function DUF1648. (92 aa)    
Predicted Functional Partners:
Bsel_2576
Hypothetical protein; KEGG: sfu:Sfum_3035 membrane-bound lytic murein transglycosylase B-like.
  
     0.686
Bsel_2662
Hypothetical protein; KEGG: dat:HRM2_14680 HsdR1.
  
     0.657
Bsel_0225
PFAM: UspA domain protein; KEGG: atc:AGR_L_2094 two-component sensor KdpD.
  
     0.629
Bsel_2090
Hypothetical protein.
  
     0.589
Bsel_2019
PFAM: YolD-like protein.
  
     0.517
Bsel_2375
Hypothetical protein.
  
     0.458
Bsel_0642
PFAM: glucose sorbosone dehydrogenase; KEGG: sme:SMa0564 dehydrogenase.
  
     0.447
Bsel_1905
PFAM: Acetamidase/Formamidase; KEGG: dvm:DvMF_1872 acetamidase/formamidase.
  
     0.437
Bsel_2782
KEGG: tgr:Tgr7_3078 hypothetical protein.
  
     0.411
Bsel_0734
PFAM: NUDIX hydrolase; KEGG: geo:Geob_2829 NUDIX hydrolase; Belongs to the Nudix hydrolase family.
       0.410
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.