STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0754TIGRFAM: arsenite-activated ATPase ArsA; KEGG: bvi:Bcep1808_4680 arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase. (587 aa)    
Predicted Functional Partners:
Bsel_0753
PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: eba:ebA4999 arsenate resistance operon, repressor ArsD.
 
   
 0.952
Bsel_0755
KEGG: spc:Sputcn32_1215 arsenical pump membrane protein; TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter.
 
   
 0.779
arsC
Arsenate reductase (thioredoxin); Catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)].
 
  
 0.695
pyrF
Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
    
 
 0.570
Bsel_2118
SMART: Tetratricopeptide repeat; KEGG: TPR Domain containing protein.
    
 0.428
Bsel_2444
KEGG: cbg:CbuG_1449 tetratricopeptide repeat family protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_3; SMART: Tetratricopeptide repeat.
    
 0.428
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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