STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0760KEGG: dat:HRM2_20630 putative type II restriction enzyme (methylase subunit). (885 aa)    
Predicted Functional Partners:
Bsel_0761
SMART: DEAD-like helicase; KEGG: fph:Fphi_1827 DEAD/DEAH box helicase-like protein.
 
    0.969
Bsel_0762
PFAM: Putative helicase A859L; KEGG: dat:HRM2_20610 hypothetical protein.
 
    0.960
Bsel_1685
PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: pca:Pcar_1454 RNA-binding protein.
  
  
 0.834
Bsel_2967
PFAM: N-6 DNA methylase; KEGG: hps:HPSH_02355 type II adenine specific methyltransferase.
 
    0.577
Bsel_0200
KEGG: hsm:HSM_1619 type I restriction-modification system, M subunit; TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase.
  
    0.500
Bsel_0201
PFAM: restriction modification system DNA specificity domain; KEGG: shn:Shewana3_4163 restriction modification system DNA specificity subunit.
  
  
 0.488
Bsel_0733
KEGG: abu:Abu_0181 DNA/RNA helicase; PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase; helicase domain protein.
  
    0.463
Bsel_0763
KEGG: sde:Sde_1829 methionine sulfoxide reductase A.
       0.456
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.