STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0769KEGG: ecr:ECIAI1_2661 conserved hypothetical protein from bacteriophage origin. (375 aa)    
Predicted Functional Partners:
Bsel_0768
Hypothetical protein.
 
     0.948
Bsel_0770
Hypothetical protein; KEGG: hde:HDEF_1660 APSE-2 prophage; hypothetical.
 
     0.948
Bsel_0771
SMART: DNA-directed DNA polymerase; KEGG: xfa:XF2525 phage-related DNA polymerase.
 
     0.948
Bsel_0773
PFAM: virulence-associated E family protein; KEGG: dno:DNO_0266 virulence-associated protein VapE2.
 
     0.892
Bsel_0774
PFAM: VRR-NUC domain protein; KEGG: ecr:ECIAI1_2667 conserved hypothetical protein from bacteriophage origin.
 
     0.839
Bsel_0775
SNF2-related protein; KEGG: xfm:Xfasm12_0427 hypothetical protein; PFAM: SNF2-related protein; SMART: DEAD-like helicase.
 
     0.839
Bsel_0767
Hypothetical protein.
       0.785
Bsel_3021
PFAM: VRR-NUC domain protein; KEGG: ypy:YPK_1202 VRR-NUC domain-containing protein.
 
     0.781
Bsel_3024
KEGG: ecr:ECIAI1_2664 putative DNA polymerase from bacteriophage origin; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase.
 
     0.781
Bsel_3025
KEGG: hde:HDEF_1660 APSE-2 prophage; hypothetical.
 
     0.781
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.