STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0772PFAM: phage antirepressor protein; BRO domain protein; KEGG: ecs:ECs1557 putative antirepressor protein. (281 aa)    
Predicted Functional Partners:
Bsel_0773
PFAM: virulence-associated E family protein; KEGG: dno:DNO_0266 virulence-associated protein VapE2.
 
     0.843
Bsel_0769
KEGG: ecr:ECIAI1_2661 conserved hypothetical protein from bacteriophage origin.
 
   
 0.747
Bsel_0768
Hypothetical protein.
 
    0.743
Bsel_0776
Hypothetical protein.
 
     0.737
Bsel_0771
SMART: DNA-directed DNA polymerase; KEGG: xfa:XF2525 phage-related DNA polymerase.
 
     0.690
Bsel_2994
TIGRFAM: phage minor structural protein.
  
    0.679
Bsel_0770
Hypothetical protein; KEGG: hde:HDEF_1660 APSE-2 prophage; hypothetical.
 
     0.678
Bsel_0803
TIGRFAM: phage minor structural protein.
  
    0.661
Bsel_0778
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: scl:sce1879 ECF family RNA polymerase sigma factor.
 
     0.657
Bsel_0802
TIGRFAM: phage tail component.
  
     0.632
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.