STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0787KEGG: bph:Bphy_7138 P27 family phage terminase small subunit; TIGRFAM: phage terminase, small subunit, P27 family; PFAM: terminase small subunit putative P27. (160 aa)    
Predicted Functional Partners:
Bsel_0788
PFAM: Terminase; KEGG: bcm:Bcenmc03_1289 terminase.
 
    0.955
Bsel_0785
Hypothetical protein.
 
     0.851
Bsel_3016
KEGG: bph:Bphy_7134 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease.
 
    0.840
Bsel_3009
PFAM: Terminase; KEGG: bcm:Bcenmc03_1289 terminase.
 
    0.801
Bsel_3002
KEGG: asu:Asuc_1242 phage head-tail adaptor, putative; TIGRFAM: phage head-tail adaptor; PFAM: putative head-tail adaptor protein.
 
     0.768
Bsel_0795
KEGG: asu:Asuc_1242 phage head-tail adaptor, putative; TIGRFAM: phage head-tail adaptor; PFAM: putative head-tail adaptor protein.
 
     0.765
Bsel_3007
KEGG: bpm:BURPS1710b_1680 HK97 family phage portal protein; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein.
 
  
 0.749
Bsel_0780
Hypothetical protein.
 
     0.748
Bsel_0790
KEGG: hch:HCH_04555 HK97 family phage portal protein; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein.
 
  
 0.747
Bsel_3015
KEGG: ZNF236; zinc finger protein 236.
 
     0.698
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.