STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0806PFAM: N-acetylmuramoyl-L-alanine amidase family 2; Sporulation domain protein; SMART: N-acetylmuramoyl-L-alanine amidase family 2. (335 aa)    
Predicted Functional Partners:
Bsel_0805
KEGG: dvl:Dvul_1067 toxin secretion/phage lysis holin; TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis.
 
  
 0.939
Bsel_0803
TIGRFAM: phage minor structural protein.
 
     0.879
Bsel_0792
KEGG: cjr:CJE1458 HK97 family major capsid protein; TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97.
 
    0.874
Bsel_0790
KEGG: hch:HCH_04555 HK97 family phage portal protein; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein.
 
  
 0.835
Bsel_0802
TIGRFAM: phage tail component.
 
    0.800
Bsel_0791
PFAM: peptidase S14 ClpP; KEGG: dac:Daci_1633 peptidase S14 ClpP; Belongs to the peptidase S14 family.
 
    0.792
Bsel_0798
TIGRFAM: phage major tail protein, phi13 family.
 
    0.786
Bsel_3005
KEGG: cjr:CJE1458 HK97 family major capsid protein; TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97.
 
    0.751
Bsel_2992
KEGG: dvu:DVU2867 holin; TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis.
 
  
 0.744
Bsel_0804
Hypothetical protein.
       0.739
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.