STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0807PFAM: Resolvase domain; Recombinase; KEGG: hch:HCH_06395 site-specific recombinase. (535 aa)    
Predicted Functional Partners:
Bsel_0808
PFAM: Resolvase domain; Recombinase; KEGG: oan:Oant_1563 resolvase domain-containing protein.
 
    
0.829
Bsel_0805
KEGG: dvl:Dvul_1067 toxin secretion/phage lysis holin; TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis.
 
  
 0.706
Bsel_0792
KEGG: cjr:CJE1458 HK97 family major capsid protein; TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97.
 
  
 0.662
Bsel_0809
PFAM: Resolvase domain; Recombinase; KEGG: bra:BRADO6418 putative recombinase.
 
    
0.619
Bsel_0806
PFAM: N-acetylmuramoyl-L-alanine amidase family 2; Sporulation domain protein; SMART: N-acetylmuramoyl-L-alanine amidase family 2.
 
    0.615
Bsel_0781
DNA methylase N-4/N-6 domain protein; KEGG: mms:mma_2757 DNA modification methylase; PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; SMART: ParB domain protein nuclease; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.609
Bsel_3014
DNA methylase N-4/N-6 domain protein; KEGG: mca:MCA2655 prophage LambdaMc01, DNA methyltransferase; PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; SMART: ParB domain protein nuclease; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.602
Bsel_0785
Hypothetical protein.
  
    0.585
Bsel_3012
Hypothetical protein.
  
    0.580
Bsel_3005
KEGG: cjr:CJE1458 HK97 family major capsid protein; TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97.
  
  
 0.530
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.