STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0880KEGG: geo:Geob_2297 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain protein; Cache domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein. (919 aa)    
Predicted Functional Partners:
Bsel_2027
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold domain protein; KEGG: gme:Gmet_0987 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein.
 
 
0.896
Bsel_2076
Diguanylate cyclase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: gme:Gmet_2721 diguanylate cyclase with GAF sensor; SMART: GGDEF domain containing protein; GAF domain protein.
 
 
 
 0.884
Bsel_2021
SMART: GGDEF domain containing protein; response regulator receiver; TIGRFAM: diguanylate cyclase; KEGG: maq:Maqu_3442 response regulator receiver modulated diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver.
 
 
 0.879
Bsel_2667
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: slo:Shew_3023 diguanylate cyclase; SMART: GGDEF domain containing protein.
 
 
 0.865
Bsel_0654
TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; KEGG: cja:CJA_2447 MorA; SMART: GGDEF domain containing protein; PAS domain containing protein.
 
 
 0.863
Bsel_1436
Diguanylate cyclase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: lpf:lpl0283 hypothetical protein; SMART: GGDEF domain containing protein; GAF domain protein.
 
 
 0.863
Bsel_2813
Diguanylate cyclase and metal dependent phosphohydrolase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; metal-dependent phosphohydrolase HD sub domain; PAS fold-4 domain protein; PAS fold domain protein; KEGG: pap:PSPA7_4198 putative sensor protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region; PAS domain containing protein.
 
 
 0.855
Bsel_2915
Diguanylate cyclase and metal dependent phosphohydrolase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; PAS fold domain protein; PAS fold-4 domain protein; KEGG: tgr:Tgr7_1990 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: GGDEF domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region; PAS domain containing protein.
 
 
 0.838
Bsel_2801
Diguanylate cyclase/phosphodiesterase with extracellular sensor; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: pin:Ping_0949 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein.
 
 
0.835
Bsel_0443
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: tcx:Tcr_1143 diguanylate cyclase; SMART: GGDEF domain containing protein.
 
 
 0.821
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.