STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0885PFAM: copper amine oxidase domain protein; SCP-like extracellular; KEGG: noc:Noc_1373 hypothetical protein. (431 aa)    
Predicted Functional Partners:
Bsel_0945
PFAM: Ig family protein; Ig domain protein; KEGG: mxa:MXAN_7200 endonuclease/exonuclease/phosphatase family protein.
  
    0.485
Bsel_3058
PFAM: S-layer domain protein; KEGG: hypothetical protein.
  
   
 0.474
Bsel_1061
Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
     0.441
Bsel_0843
PFAM: polysaccharide lyase 8 alpha-helical; polysaccharide lyase family 8; polysaccharide lyase family 8 domain protein; S-layer domain protein; Ig domain protein group 2 domain protein; KEGG: vfm:VFMJ11_A1113 hyaluronate lyase; SMART: Ig domain protein group 2 domain protein.
 
    0.432
Bsel_1060
Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
     0.423
Bsel_0822
PFAM: S-layer domain protein; KEGG: hypothetical protein.
 
    0.421
Bsel_0866
PFAM: S-layer domain protein; KEGG: hypothetical protein.
  
     0.421
Bsel_3057
PFAM: S-layer domain protein; KEGG: hypothetical protein.
  
     0.417
Bsel_0942
PFAM: S-layer domain protein; KEGG: hypothetical protein.
  
     0.416
Bsel_0827
PFAM: S-layer domain protein; Ig domain protein; KEGG: hypothetical protein.
  
     0.413
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.