STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0900TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: eta:ETA_26160 N-carbamoyl-L-amino acid hydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein. (428 aa)    
Predicted Functional Partners:
Bsel_0574
Allantoinase; KEGG: scl:sce5876 allantoinase; TIGRFAM: allantoinase; PFAM: amidohydrolase; Amidohydrolase 3.
 
 
 0.956
Bsel_0585
PFAM: aminotransferase class V; KEGG: dda:Dd703_0911 aminotransferase class V.
 
 
  0.949
Bsel_0581
OHCU decarboxylase; KEGG: sme:SM_b20874 hypothetical protein; TIGRFAM: OHCU decarboxylase; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase.
   
 0.924
Bsel_0584
TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: mes:Meso_2546 allantoate amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein.
  
  
 
0.910
Bsel_0899
KEGG: pna:Pnap_4043 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria.
       0.693
Bsel_0583
Hydroxyisourate hydrolase; KEGG: reh:H16_A1009 transthyretin-like protein; TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
   
 0.624
Bsel_0901
KEGG: mpt:Mpe_B0536 CdaR family transcriptional regulator; PFAM: GAF domain protein; SMART: GAF domain protein.
 
     0.518
Bsel_0898
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: sfu:Sfum_3144 tripartite ATP-independent periplasmic transporter DctQ.
       0.443
Bsel_0897
KEGG: efe:EFER_1529 putative TRAP dicarboxylate transporter, DctM subunit precursor, putative transmembrane protein; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; Citrate transporter.
       0.440
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.