STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0902KEGG: spe:Spro_4372 transcriptional antiterminator, BglG. (630 aa)    
Predicted Functional Partners:
Bsel_0904
PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: kpu:KP1_0051 putative sugar phosphotransferase component IIB.
 
  
 0.910
Bsel_0903
Putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: aha:AHA_0173 ascorbate-specific phosphotransferase enzyme IIA component.
     0.904
Bsel_0905
PFAM: putative sugar-specific permease SgaT/UlaA; KEGG: spq:SPAB_00632 ascorbate-specific PTS system enzyme IIC.
 
  
 0.859
Bsel_1868
Lysophospholipase-like protein; KEGG: bbt:BBta_1696 putative alpha/beta hydrolase superfamily protein.
  
     0.726
Bsel_2232
KEGG: maq:Maqu_1305 hypothetical protein.
  
     0.719
Bsel_2776
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: nis:NIS_1814 ferredoxin-like protein.
  
     0.709
Bsel_0931
KEGG: vpa:VPA1424 PTS system, fructose-specific IIABC component; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose-specific IIB subunit; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2.
  
  
 0.671
Bsel_1480
Rhodanese domain protein; KEGG: abu:Abu_0075 rhodanese-like sulfur transferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein.
  
     0.660
Bsel_1863
KEGG: esa:ESA_01917 hypothetical protein.
  
     0.654
Bsel_1884
Hypothetical protein.
  
    0.607
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.