STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0905PFAM: putative sugar-specific permease SgaT/UlaA; KEGG: spq:SPAB_00632 ascorbate-specific PTS system enzyme IIC. (422 aa)    
Predicted Functional Partners:
Bsel_0904
PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: kpu:KP1_0051 putative sugar phosphotransferase component IIB.
 
 
 0.997
Bsel_0903
Putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: aha:AHA_0173 ascorbate-specific phosphotransferase enzyme IIA component.
 
 
 0.993
Bsel_1407
KEGG: asa:ASA_3060 phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr.
    
 0.904
Bsel_2429
Phosphotransferase system, phosphocarrier protein HPr; PFAM: phosphoryl transfer system HPr; KEGG: lpp:lpp0540 hypothetical protein.
    
 0.904
Bsel_0902
KEGG: spe:Spro_4372 transcriptional antiterminator, BglG.
 
  
 0.859
Bsel_0669
KEGG: ypi:YpsIP31758_1310 pyridine nucleotide-disulphide oxidoreductase family protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SirA family protein; SMART: Rhodanese domain protein; Belongs to the sulfur carrier protein TusA family.
   
    0.733
hisI
phosphoribosyl-ATP diphosphatase; KEGG: ppr:PBPRA1085 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; In the N-terminal section; belongs to the PRA-CH family.
   
    0.696
Bsel_2189
TIGRFAM: riboflavin synthase, alpha subunit; KEGG: apa:APP7_0407 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein.
   
    0.680
rpmE2
KEGG: aeh:Mlg_2751 50S ribosomal protein L31 type B; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31.
   
    0.680
Bsel_0931
KEGG: vpa:VPA1424 PTS system, fructose-specific IIABC component; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose-specific IIB subunit; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2.
 
  
 0.660
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.