STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0929Transcriptional regulator, DeoR family; KEGG: smt:Smal_3818 DNA-binding transcriptional regulator AgaR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR. (259 aa)    
Predicted Functional Partners:
Bsel_0930
1-phosphofructokinase; KEGG: dat:HRM2_08650 PfkB1; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.983
Bsel_0931
KEGG: vpa:VPA1424 PTS system, fructose-specific IIABC component; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose-specific IIB subunit; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2.
 
  
 0.982
Bsel_2541
PFAM: FAD dependent oxidoreductase; KEGG: mxa:MXAN_7329 glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.562
Bsel_0928
PFAM: deoxyribodipyrimidine photolyase-related protein; DNA photolyase FAD-binding; KEGG: fta:FTA_0364 deoxyribodipyrimidine photolyase-related protein.
       0.532
Bsel_1074
PTS system, glucose-specific IIBC subunit; KEGG: stm:STM2758 putative phosphotransferase system IIC component; TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, glucose subfamily, IIA subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; sugar-specific permease EIIA 1 domain; Phosphotransferase system EIIB/cysteine, phosphorylation site.
 
  
 0.524
Bsel_0932
PFAM: Dimethylmenaquinone methyltransferase; KEGG: pna:Pnap_0600 dimethylmenaquinone methyltransferase.
       0.503
Bsel_1075
Transcriptional antiterminator, BglG; PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: pct:PC1_0742 transcriptional antiterminator, BglG.
 
  
 0.493
Bsel_1406
Transcriptional antiterminator, BglG; PFAM: PRD domain protein; CAT RNA-binding domain protein; KEGG: dze:Dd1591_0746 transcriptional antiterminator, BglG.
  
  
 0.454
Bsel_3168
TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; KEGG: ribose 5-phosphate isomerase B family protein; K01808 ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase.
  
  
 0.454
Bsel_2543
KEGG: fph:Fphi_1035 major intrinsic protein family permease; TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
  
 0.453
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.