STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0934PFAM: lipolytic protein G-D-S-L family; KEGG: saz:Sama_2630 lipolytic enzyme, G-D-S-L. (286 aa)    
Predicted Functional Partners:
Bsel_0936
KEGG: dia:Dtpsy_1056 ABC-2 type transporter.
 
    0.951
Bsel_0935
KEGG: acp:A2cp1_0670 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.852
Bsel_0945
PFAM: Ig family protein; Ig domain protein; KEGG: mxa:MXAN_7200 endonuclease/exonuclease/phosphatase family protein.
  
 
 0.849
Bsel_0803
TIGRFAM: phage minor structural protein.
  
 
 0.722
Bsel_2994
TIGRFAM: phage minor structural protein.
  
 
 0.722
Bsel_2489
PFAM: Protein of unknown function DUF2140.
 
  
 0.718
Bsel_2996
KEGG: pmr:PMI1973 phage tail fiber protein (tape measure protein); TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region.
   
 
 0.624
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
  
  
 0.542
Bsel_0830
PFAM: Fibronectin type III domain protein; KEGG: dal:Dalk_0547 fibronectin type III domain protein.
  
  
 0.515
Bsel_0542
KEGG: SPRT-like metalloprotease; PFAM: protein of unknown function DUF335 SprT; SMART: protein of unknown function SprT; Belongs to the SprT family.
  
     0.471
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.