STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0935KEGG: acp:A2cp1_0670 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (310 aa)    
Predicted Functional Partners:
Bsel_0936
KEGG: dia:Dtpsy_1056 ABC-2 type transporter.
 
 
 0.968
Bsel_0934
PFAM: lipolytic protein G-D-S-L family; KEGG: saz:Sama_2630 lipolytic enzyme, G-D-S-L.
 
  
 0.852
Bsel_1892
Hypothetical protein; KEGG: sde:Sde_3735 heavy metal efflux pump CzcA.
 
 
 0.836
Bsel_2688
Hypothetical protein; KEGG: cps:CPS_4735 copper ABC transporter, permease protein.
  
 
 0.528
Bsel_0937
TIGRFAM: dihydroxyacetone kinase, DhaK subunit; KEGG: scl:sce2491 Glycerone kinase DAK1 domain-containing protein; PFAM: Dak kinase.
  
   0.481
Bsel_0933
Hypothetical protein.
       0.466
Bsel_0244
KEGG: prw:PsycPRwf_0086 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
0.463
Bsel_0938
KEGG: asu:Asuc_1440 dihydroxyacetone kinase ADP-binding subunit; TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase.
  
   0.429
Bsel_3287
PFAM: ABC-2 type transporter; KEGG: sat:SYN_01665 ABC-type multidrug transport system, permease component.
 
  
 0.419
Bsel_0655
Cyclic nucleotide-binding protein; KEGG: ppabcb22; ATP-binding cassette transporter, subfamily B, member 22, group LLP protein PpABCB22; PFAM: ABC transporter related; cyclic nucleotide-binding; ABC transporter transmembrane region; SMART: AAA ATPase; cyclic nucleotide-binding.
  
 
0.416
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.