STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0940KEGG: abb:ABBFA_001712 bacterial regulatory protein, TetR family protein; TIGRFAM: dihydroxyacetone kinase regulator; PFAM: regulatory protein TetR. (194 aa)    
Predicted Functional Partners:
Bsel_0941
TIGRFAM: dihydroxyacetone kinase DhaK1b subunit; KEGG: bra:BRADO4609 PTS-dependent dihydroxyacetone kinase, dihydroxyacetone binding subunit DhaK; PFAM: Dak kinase.
 
     0.812
Bsel_0393
PFAM: regulatory protein TetR; KEGG: apa:APP7_0893 putative transcriptional regulator.
  
     0.745
Bsel_0939
KEGG: bra:BRADO4613 putative dihydroxyacetone kinase phosphotransfer protein (DhaH/M-like); TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; PFAM: PTS system fructose subfamily IIA component.
 
   
 0.644
Bsel_0938
KEGG: asu:Asuc_1440 dihydroxyacetone kinase ADP-binding subunit; TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase.
 
     0.626
Bsel_0937
TIGRFAM: dihydroxyacetone kinase, DhaK subunit; KEGG: scl:sce2491 Glycerone kinase DAK1 domain-containing protein; PFAM: Dak kinase.
 
     0.567
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.452
Bsel_0395
Membrane protein-like protein; KEGG: Axoneme-associated protein GASP-180.
 
  
 0.440
Bsel_2702
Transcriptional regulator, MerR family; KEGG: mxa:MXAN_5120 transcriptional activator TipA; PFAM: TipAS antibiotic-recognition domain protein; regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR.
  
   
 0.428
Bsel_1047
KEGG: hypothetical protein; TIGRFAM: YhgE/Pip N-terminal domain protein; YhgE/Pip C-terminal domain protein; PFAM: ABC-2 type transporter.
 
  
 0.406
Bsel_0394
Exporter of the RND superfamily protein-like protein; KEGG: cja:CJA_3753 putative transporter.
 
     0.401
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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