STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0941TIGRFAM: dihydroxyacetone kinase DhaK1b subunit; KEGG: bra:BRADO4609 PTS-dependent dihydroxyacetone kinase, dihydroxyacetone binding subunit DhaK; PFAM: Dak kinase. (323 aa)    
Predicted Functional Partners:
Bsel_0938
KEGG: asu:Asuc_1440 dihydroxyacetone kinase ADP-binding subunit; TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase.
  
 0.981
Bsel_0939
KEGG: bra:BRADO4613 putative dihydroxyacetone kinase phosphotransfer protein (DhaH/M-like); TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; PFAM: PTS system fructose subfamily IIA component.
 
 
 0.978
Bsel_0940
KEGG: abb:ABBFA_001712 bacterial regulatory protein, TetR family protein; TIGRFAM: dihydroxyacetone kinase regulator; PFAM: regulatory protein TetR.
 
     0.812
Bsel_0603
GAF modulated sigma54 specific transcriptional regulator, Fis family; KEGG: dat:HRM2_47650 signal-transduction and transcriptional-control protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase.
   
 
 0.610
Bsel_2543
KEGG: fph:Fphi_1035 major intrinsic protein family permease; TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
  
 0.517
Bsel_0937
TIGRFAM: dihydroxyacetone kinase, DhaK subunit; KEGG: scl:sce2491 Glycerone kinase DAK1 domain-containing protein; PFAM: Dak kinase.
 
    
0.501
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.