STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0945PFAM: Ig family protein; Ig domain protein; KEGG: mxa:MXAN_7200 endonuclease/exonuclease/phosphatase family protein. (474 aa)    
Predicted Functional Partners:
Bsel_0934
PFAM: lipolytic protein G-D-S-L family; KEGG: saz:Sama_2630 lipolytic enzyme, G-D-S-L.
  
 
 0.849
Bsel_0944
Hypothetical protein.
       0.724
Bsel_0946
Hypothetical protein.
       0.683
Bsel_0943
PFAM: SCP-like extracellular; KEGG: scl:sce1577 putative beta-galactosidase.
  
    0.679
Bsel_0947
KEGG: dal:Dalk_3426 regulator of chromosome condensation RCC1; PFAM: Ig domain protein group 2 domain protein; glycoside hydrolase family 13 domain protein; regulator of chromosome condensation RCC1; SMART: Ig domain protein group 2 domain protein.
       0.631
Bsel_1035
PFAM: Integrase catalytic region; KEGG: dat:HRM2_44510 tranposase.
  
     0.629
Bsel_0830
PFAM: Fibronectin type III domain protein; KEGG: dal:Dalk_0547 fibronectin type III domain protein.
  
  
 0.595
Bsel_0844
PFAM: S-layer domain protein; KEGG: ppd:Ppro_1307 allergen V5/TPX-1 family protein.
 
    0.544
Bsel_0425
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; SMART: MCP methyltransferase CheR-type; PAC repeat-containing protein; TIGRFAM: PAS sensor protein; KEGG: dma:DMR_11050 putative chemotaxis CheB/CheR fusion protein; PFAM: MCP methyltransferase CheR-type; PAS fold-3 domain protein; CheB methylesterase.
 
   
 0.503
Bsel_3022
PFAM: virulence-associated E family protein; KEGG: dno:DNO_0279 virulence-associated protein VapE1.
  
     0.491
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.