STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0948KEGG: hypothetical protein. (1262 aa)    
Predicted Functional Partners:
Bsel_0949
Hypothetical protein.
       0.773
Bsel_0950
Von Willebrand factor type A; KEGG: lpp:lpp2914 hypothetical protein; PFAM: von Willebrand factor type A; Ig domain protein group 2 domain protein; SMART: von Willebrand factor type A; Ig domain protein group 2 domain protein.
     
 0.582
Bsel_0830
PFAM: Fibronectin type III domain protein; KEGG: dal:Dalk_0547 fibronectin type III domain protein.
  
  
 0.540
Bsel_0952
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; protease-associated PA domain protein; S-layer domain protein; protein of unknown function DUF1034; KEGG: scl:sce3689 subtilisin like protease; Belongs to the peptidase S8 family.
  
  
 0.424
Bsel_1190
Hypothetical protein.
    
 
 0.423
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.