STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0952PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; protease-associated PA domain protein; S-layer domain protein; protein of unknown function DUF1034; KEGG: scl:sce3689 subtilisin like protease; Belongs to the peptidase S8 family. (1430 aa)    
Predicted Functional Partners:
Bsel_0830
PFAM: Fibronectin type III domain protein; KEGG: dal:Dalk_0547 fibronectin type III domain protein.
  
  
 0.677
Bsel_0947
KEGG: dal:Dalk_3426 regulator of chromosome condensation RCC1; PFAM: Ig domain protein group 2 domain protein; glycoside hydrolase family 13 domain protein; regulator of chromosome condensation RCC1; SMART: Ig domain protein group 2 domain protein.
  
 
 0.577
Bsel_0810
PFAM: S-layer domain protein; Fibronectin type III domain protein; KEGG: hypothetical protein.
 
 
0.532
Bsel_0045
PFAM: 3D domain protein; protein of unknown function DUF348; G5 domain protein; KEGG: hypothetical protein.
  
  
 0.512
Bsel_0660
PFAM: NHL repeat containing protein; KEGG: gbm:Gbem_2063 NHL repeat containing protein.
  
 
 0.501
Bsel_0716
Hypothetical protein; KEGG: sde:Sde_3023 endoglucanase-like.
  
 
 0.501
Bsel_0873
KEGG: Muc3; mucin 3, intestinal; TIGRFAM: conserved repeat domain protein; LPXTG-motif cell wall anchor domain protein; PFAM: Cna B domain protein; protein of unknown function DUF11.
  
 
 0.501
Bsel_1728
Hypothetical protein; KEGG: GK17402 gene product from transcript GK17402-RA.
  
 
 0.501
Bsel_0606
LPXTG-motif cell wall anchor domain protein; KEGG: hypothetical protein similar to erythrocyte membrane-associated giant protein antigen 332; TIGRFAM: LPXTG-motif cell wall anchor domain protein; conserved repeat domain protein; PFAM: Cna B domain protein; Gram-positive anchor; Collagen binding domain protein.
  
  
 0.499
Bsel_1754
CheC, inhibitor of MCP methylation / FliN fusion protein; KEGG: bbr:BB2580 flagellar motor switch protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein.
  
    0.482
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.