STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0965PFAM: Protein of unknown function DUF1980; KEGG: dal:Dalk_1553 membrane protein-like protein. (335 aa)    
Predicted Functional Partners:
Bsel_0966
PFAM: permease; KEGG: dal:Dalk_1552 permease.
 
  
 0.947
Bsel_2242
KEGG: rlt:Rleg2_4899 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
  
     0.613
Bsel_1310
Hypothetical protein; Possible subunit of a heme lyase.
  
     0.586
Bsel_2183
Hypothetical protein.
  
     0.527
Bsel_1308
Hypothetical protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
  
     0.501
Bsel_2483
PFAM: ABC transporter EcsB; KEGG: similar to AGAP012156-PA.
  
     0.463
Bsel_0967
Hypothetical protein; KEGG: pna:Pnap_2858 insertion element protein.
       0.453
Bsel_2897
PFAM: regulatory protein TetR; KEGG: gsu:GSU2741 TetR family transcriptional regulator.
  
     0.436
Bsel_0676
PFAM: protein of unknown function DUF58; KEGG: psa:PST_1154 hypothetical protein.
  
     0.426
Bsel_2316
Hypothetical protein.
  
     0.421
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.