STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bsel_0972Formamidase; KEGG: sme:SMc04290 hypothetical protein; PFAM: Acetamidase/Formamidase. (310 aa)    
Predicted Functional Partners:
Bsel_0573
PFAM: Amidase; KEGG: hypothetical protein LOC100240917; Belongs to the amidase family.
 
  
 0.537
Bsel_0158
PFAM: isochorismatase hydrolase; KEGG: lhk:LHK_01309 isochorismatase hydrolase.
 
    0.517
Bsel_0970
TIGRFAM: pyruvate, phosphate dikinase; KEGG: gsu:GSU0580 pyruvate phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein; Belongs to the PEP-utilizing enzyme family.
       0.504
Bsel_0971
Protein of unknown function DUF299; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.
       0.504
Bsel_0079
PFAM: MgtC/SapB transporter; KEGG: pca:Pcar_1965 putative MgtC family protein.
   
    0.497
Bsel_3293
PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: rfr:Rfer_0435 NAD-dependent epimerase/dehydratase.
  
     0.481
Bsel_2555
PFAM: protein of unknown function DUF1028; Putative peptidoglycan binding; KEGG: afw:Anae109_1192 hypothetical protein.
 
     0.400
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.